If I have a big environment with 100,000 users, I am planning to split the servers for WFE, Application Servers and Batch Processing.
I wonder if there is an specific way to enable/install specific timer jobs only in one server or group of servers
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You could do it from the TimerJob definitions by specifying the SPServer and the SPJobLockType. MSDN
Though this would be easier if your solution was not already in production