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I can't find a good official Microsoft reference anymore for using CSOM with PowerShell for SharePoint Online.
Working with PowerShell is slightly different then: JavaScript API reference for SharePoint REST API reference for SharePoint .NET server API reference for SharePoint .NET client API reference for SharePoint
Like here: https://msdn.microsoft.com/en-us/library/jj162979.aspx
And here: https://msdn.microsoft.com/en-us/library/ee537855(v=office.14).aspx
There are articles about PowerShell in SharePoint online.
Introduction to the SharePoint Online Management Shell.
https://technet.microsoft.com/en-us/library/fp161388.aspx
Create SharePoint Online sites and add users with Office 365 PowerShell.
https://technet.microsoft.com/en-us/library/mt771886.aspx
Manage SharePoint Online users and groups with Office 365 PowerShell.
https://technet.microsoft.com/en-us/library/mt771884.aspx
More reference:
Using CSOM in PowerShell scripts with Office 365.
http://www.sharepointnutsandbolts.com/2013/12/Using-CSOM-in-PowerShell-scripts-with-Office365.html
